Nakamura, Shota

Profile

Dr. Nakamura obtained his Ph.D. from Osaka University in 2006. He joined RIMD as SA Assistant in Thailand-Japan research collaboratin center in 2006. He was appoited as SA Assis. Prof. at Dept. of Infection Metagenomics in 2010, and Associ. Prof. at Dept. of Genome Informatics in 2011. He is at his current position from 2016.

Publication

  • 1:Benchmark of 16S rRNA gene amplicon sequencing using Japanese gut microbiome data from the V1-V2 and V3-V4 primer sets. Kameoka S., et al. BMC Genomics. 2021 Jul 10;22(1):527.
  • 2: Interplay of a secreted protein with type IVb pilus for efficient enterotoxigenic Escherichia coli colonization. Oki H., et al. Proc Natl Acad Sci U S A. 2018 115(28):7422-7427.
  • 3: Fungal ITS1 Deep-Sequencing Strategies to Reconstruct the Composition of a 26-Species Community and Evaluation of the Gut Mycobiota of Healthy Japanese Individuals. Motooka D., et al. Front Microbiol. 2017 8:238.
  • 4: Homo-trimeric Structure of the Type IVb Minor Pilin CofB Suggests Mechanism of CFA/III Pilus Assembly in Human Enterotoxigenic Escherichia coli. Kawahara K., et al., J Mol Biol. 2016 428(6):1209-1226.

Lab

Abe, Ryuichiro

International Research Center for Infectious Diseases

Laboratory of Bacterial Pathogenesis

Akira, Shizuo

Division of Host Defense

Department of Host Defense

Arase, Hisashi

Division of Host Defense

Department of Immunochemistry

Ebina, Hirotaka

BIKEN Innovative Vaccine Research Alliance Laboratories

Virus Vaccine Group

Hara, Eiji

Division of Cellular and Molecular Biology

Department of Molecular Microbiology

Horiguchi, Yasuhiko

Division of Infectious Disease

Department of Molecular Bacteriology

Horii, Toshihiro

Endowed Chair

Department of Malaria Vaccine Development

Iida, Tetsuya

Research Center for Infectious Disease Control

Department of Bacterial Infections

Ikawa, Masahito

Bioinformatics Center

Department of Experimental Genome Research

Ishitani, Tohru

Division of Cellular and Molecular Biology

Department of Homeostatic Regulation

Iwanaga, Shiroh

Research Center for Infectious Disease Control

Department of Molecular Protozoology

Iwasaki, Masaharu

International Research Center for Infectious Diseases

Laboratory of Emerging Viral Diseases

Kobayashi, Takeshi

Research Center for Infectious Disease Control

Department of Virology

Kotani, Ai

Division of Cellular and Molecular Biology

Department of Regulation of Infectious Cancer

Matsuura, Yoshiharu

Research Center for Infectious Disease Control

Laboratory of Virus Control

Murakami, Yoshiko

Division of Host Defense

Laboratory of Immunoglycobiology

Shioda, Tatsuo

Division of Infectious Disease

Department of Viral Infections

Standley, Daron

Bioinformatics Center

Department of Genome Informatics

Suzuki, Kazuhiro

Division of Host Defense

Department of Immune Response Dynamics

Takakura, Nobuyuki

Division of Cellular and Molecular Biology

Department of Signal Transduction

Tsukamoto, Kentaro

International Research Center for Infectious Diseases

Laboratory of Bacterial Zoonoses

Watanabe, Tokiko

Division of Infectious Disease

Department of Molecular Virology

Yamamoto, Masahiro

Division of Infectious Disease

Department of Immunoparasitology

Yamasaki, Sho

Division of Host Defense

Department of Molecular Immunology

Yoshioka, Yasuo

BIKEN Innovative Vaccine Research Alliance Laboratories

Vaccine Creation Group