Kenji Kamimoto

Profile
Dr. Kamimoto graduated from the Department of Biophysics and Biochemistry, Faculty of Science, The University of Tokyo in 2012. He received his Ph.D. from the University of Tokyo in 2017. He was appointed as a project-associated assistant professor at the Institute of Molecular and Cellular Biosciences, The University of Tokyo in 2017. He moved to Washington University in St. Louis as a postdoctoral researcher in 2017 and was promoted to senior scientist in 2022. He was appointed associate professor at RIMD in 2024. He took his current position in the Division of Cellular and Molecular Biology at RIMD in 2025. He is also appointed as professor position in the Research Promotion Chair, Single Cell Dynamics Modeling Group at Premium Research Institute for Human Metarverse Medicine (PRIMe).
Publication
- 1. Single-cell lineage capture across genomic modalities with CellTag-multi reveals fate-specific gene regulatory changes. Jindal, K., et al., Nature Biotechnology (2024) 42, 946–959.
- 2. Defining cardiac functional recovery in end-stage heart failure at single-cell resolution. Amrute, J.M. et al., Nature Cardiovascular Research. (2023) 2, 399–416.
- 3. Dissecting cell identity via network inference and in silico gene perturbation. Kamimoto, K.,et al., Nature (2023) 614, 742–751.
- 4. Gene regulatory network reconfiguration in direct lineage reprogramming. Kamimoto, K., et al., Stem Cell Reports (2023) 18, 1, 97–112
- 5. The coding and long noncoding single-cell atlas of the developing human fetal striatum. Bocchi, V.D., et al., Science (2021) 1979-372. 10.1126/science.abf5759,
- 6. Single-cell mapping of lineage and identity in direct reprogramming. Biddy, B.A., et al., Nature (2018) 564, 219–224.

Abe, Ryuichiro
International Research Center for Infectious Diseases
Laboratory of Bacterial Pathogenesis

Akira, Shizuo
Division of Host Defense
Department of Host Defense
Arase, Hisashi
Division of Host Defense
Department of Immunochemistry

Ebina, Hirotaka
BIKEN Innovative Vaccine Research Alliance Laboratories
Virus Vaccine Group

Fujimoto, Kosuke
Division of Infectious Disease
Department of Microbial Regulation

Hara, Eiji
Division of Cellular and Molecular Biology
Department of Molecular Biology

Horii, Toshihiro
Research Center for Infectious Disease Control
Laboratory of Malaria Vaccine Development

Iida, Tetsuya
Research Center for Infectious Disease Control
Department of Bacterial Infections

Ikawa, Masahito
Bioinformatics Center
Department of Experimental Genome Research

Ishitani, Tohru
Division of Cellular and Molecular Biology
Department of Homeostatic Regulation

Iwanaga, Shiroh
Research Center for Infectious Disease Control
Department of Molecular Protozoology

Iwasaki, Masaharu
International Research Center for Infectious Diseases
Laboratory of Emerging Viral Diseases

Kobayashi, Takeshi
Research Center for Infectious Disease Control
Department of Virology

Kotani, Ai
Division of Cellular and Molecular Biology
Department of Regulation of Infectious Cancer

Matsuura, Yoshiharu
Research Center for Infectious Disease Control
Laboratory of Virus Control

Murakami, Yoshiko
Division of Host Defense
Laboratory of Immunoglycobiology

Nakamura, Shota
Bioinformatics Center
Department of Infection Metagenomics

Nakatani, Yoichiro
Bioinformatics Center
Department of Biological Informatics Laboratory of Medical and Evolutionary Genomics

Standley, Daron
Bioinformatics Center
Department of Genome Informatics

Suzuki, Kazuhiro
Division of Host Defense
Department of Immune Response Dynamics

Takakura, Nobuyuki
Division of Cellular and Molecular Biology
Department of Signal Transduction

Tsukamoto, Kentaro
International Research Center for Infectious Diseases
Laboratory of Bacterial Zoonoses

Watanabe, Tokiko
Division of Infectious Disease
Department of Molecular Virology

Yamamoto, Masahiro
Division of Infectious Disease
Department of Immunoparasitology

Yamasaki, Sho
Division of Host Defense
Department of Molecular Immunology

Yamasaki, Shotaro
Bioinformatics Center
Department of Biological Informatics Laboratory of RNA Informatics

Yoshioka, Yasuo
BIKEN Innovative Vaccine Research Alliance Laboratories
Vaccine Creation Group
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