Yamasaki, Shotaro
Profile
Dr. Yamasaki graduated from the Faculty of Agriculture, Kobe University in 2011. He received his Ph.D. from the Graduate School of Biological Sciences, Nara Institute of Science and Technology in 2016 for his research on plant mRNA translation mechanisms. Thereafter he worked as a postdoctoral researcher (2016) and an assistant professor (2021) at Nara Institute of Science and Technology. At the institute, he began studies on gene regulation mechanisms and the development of a sequence optimization system for the mass production of useful proteins. He took his current position as an Associate Professor of RIMD in 2024.
Publication
- 1.Sequence features around cleavage sites are highly conserved among different species and a critical determinant for RNA cleavage position across eukaryotes. Ueno D., et al., J. Biosci. Bioeng. (2022) 143: 450-461
- 2.Methods for detecting RNA degradation intermediates in plants. Ueno D., et al., Plant Sci. (2022) 318: 111241
- 3.Feature selection for RNA cleavage efficiency at specific sites using the LASSO regression model in Arabidopsis thaliana. Ueno D., et al., BMC Bioinformatics (2022) 22: 380
- 4.Identification of 5'-untranslated regions that function as effective translational enhancers in monocotyledonous plant cells using a novel method of genome-wide analysis. Yamasaki, S., et al., Plant Biotechnol. (2018) 35: 365-373
- 5.Arabidopsis thaliana cold-regulated 47 gene 5-untranslated region enables stable high-level expression of transgenes. Yamasaki, S., et al., J. Biosci. Bioeng. (2018) 125: 124-130
- 6.Changes in Polysome Association of mRNA Throughout Growth and Development in Arabidopsis thaliana. Yamasaki, S., et al., Plant Cell Physiol. (2015) 56: 2169-2180
Abe, Ryuichiro
International Research Center for Infectious Diseases
Laboratory of Bacterial Pathogenesis
Akira, Shizuo
Division of Host Defense
Department of Host Defense
Arase, Hisashi
Division of Host Defense
Department of Immunochemistry
Ebina, Hirotaka
BIKEN Innovative Vaccine Research Alliance Laboratories
Virus Vaccine Group
Hara, Eiji
Division of Cellular and Molecular Biology
Department of Molecular Biology
Horiguchi, Yasuhiko
Division of Infectious Disease
Department of Molecular Bacteriology
Horii, Toshihiro
Endowed Chair
Department of Malaria Vaccine Development
Iida, Tetsuya
Research Center for Infectious Disease Control
Department of Bacterial Infections
Ikawa, Masahito
Bioinformatics Center
Department of Experimental Genome Research
Ishitani, Tohru
Division of Cellular and Molecular Biology
Department of Homeostatic Regulation
Iwanaga, Shiroh
Research Center for Infectious Disease Control
Department of Molecular Protozoology
Iwasaki, Masaharu
International Research Center for Infectious Diseases
Laboratory of Emerging Viral Diseases
Kenji Kamimoto
Bioinformatics Center
Department of Biological Informatics Laboratory of Systems Biology
Kobayashi, Takeshi
Research Center for Infectious Disease Control
Department of Virology
Kotani, Ai
Division of Cellular and Molecular Biology
Department of Regulation of Infectious Cancer
Matsuura, Yoshiharu
Research Center for Infectious Disease Control
Laboratory of Virus Control
Murakami, Yoshiko
Division of Host Defense
Laboratory of Immunoglycobiology
Nakamura, Shota
Bioinformatics Center
Department of Infection Metagenomics
Nakatani, Yoichiro
Bioinformatics Center
Department of Biological Informatics Laboratory of Medical and Evolutionary Genomics
Shioda, Tatsuo
Division of Infectious Disease
Department of Viral Infections
Standley, Daron
Bioinformatics Center
Department of Genome Informatics
Suzuki, Kazuhiro
Division of Host Defense
Department of Immune Response Dynamics
Takakura, Nobuyuki
Division of Cellular and Molecular Biology
Department of Signal Transduction
Tsukamoto, Kentaro
International Research Center for Infectious Diseases
Laboratory of Bacterial Zoonoses
Watanabe, Tokiko
Division of Infectious Disease
Department of Molecular Virology
Yamamoto, Masahiro
Division of Infectious Disease
Department of Immunoparasitology
Yamasaki, Sho
Division of Host Defense
Department of Molecular Immunology
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